cBioPortal
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Sep 22, 2021

June 23, 2021

May 10, 2021

May 4, 2021

April 21, 2021

April 20, 2021

March 30, 2021

March 11, 2021

February 16, 2021

January 28, 2021

January 12, 2021

December 31, 2020

November 3, 2020

    New Feature: The map of local installations of cBioPortal is available now. Please consider registering your instance here.
    Enhancement: upgraded the Genomic Evolution tab in Patient View with timeline Example

October 20, 2020

    Enhancement: Expression tab has now been merged into the Plots tab

October 16, 2020

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October 13, 2020

    Enhancement: Study View now allows comparing samples with mutations or copy number alterations in different genes
    New Feature: When treatment timeline is available (e.g. in this study), Study View now allows the selection and comparison of patients treated with specific drugs, or samples sequenced pre or post specific drug treatments

September 30, 2020

September 22, 2020

    Enhancement: The timeline feature in Patient View has been refactored with an improved UI. Example
    Enhancement: Logrank p-values are now provided for all survival analysis (previously only availalbe when comparing two groups). Example

August 11, 2020

July 21, 2020

    New Feature: The Mutations tab now has the option to show mutation effects for different transcripts / isoforms. Note that some annotation features are only available for the canonical isoform. example
    Enhancement: The Plots tab is now supported in multi-study queries. example
    New Feature: You can now share custom groups in the Study View example

June 11, 2020

June 9, 2020

June 2, 2020

    Enhancement: Pediatric cancer studies are now grouped and highlighted in the query page

May 6, 2020

April 24, 2020

    New Feature: Add a new chart on the Study View for selecting samples based on pre-defined case lists:

April 10, 2020

April 3, 2020

    New Feature: Extended the Comparison tab to support the comparison of altered samples per gene or alteration. This example query compares NSCLC patients with 1) both mutated and amplified EGFR, 2) mutated EGFR only, and 3) amplified EGFR only.
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March 27, 2020

    Enhancement: User selections in the Plots tab are now saved in the URL. example
    New Feature: Added table of data availability per profile in the Study View. example

March 20, 2020

    Enhancement: Extended Survival Analysis to support more outcome measures. example
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March 18, 2020

March 3, 2020

    New Feature: Added Pathways tab to the Results View page, which visualizes the alteration frequencies of genes in pathways of interest. The pathways are pulled from https://www.pathwaymapper.org and shown in a read only view. One can edit these pathways in the PathwayMapper editor. For more information see the tutorial.

February 12, 2020

February 6, 2020

    New Feature: Extend the recent group comparison feature by allowing comparisons inside the Results View page. The new tab allows for quick comparison of altered vs unaltered cases by survival, clinical information, mutation, copy number events and mRNA expression:
    Performance enhancement: the Study View's mutation table now loads faster for studies with multiple gene panels. For the genie portal, which has a study with many different gene panels this resulted in a speed-up from ~90-120 seconds to 5 seconds.
    Read more about the v3.2.2 release here

January 30, 2020

    Enhancement: Show HGVSg in mutations table and linkout to Genome Nexus:
    Enhancement: Add a pencil button near gene list in results page which opens interface for quickly modifying the oql of the query:
    See more updates here

January 29, 2020

December 19, 2019

    Enhancement: We restored support for submitting large queries from external applications using HTTP POST requests. Accepted parameters are the same as appear in the url of a query submitted from the homepage.
    See more updates here

December 12, 2019

    Enhancement: Several enhancements to the display of gene panels on the Patient View page, by The Hyve, described in more detail here
    Enhancement: Add Count Bubbles to Oncoprint Toolbar
    See more updates here

November 29, 2019

    Enhancement: Support group comparison for custom charts in Study View page
    Enhancement: Performance improvement of Co-Expression analysis.
    Enhancement: Kaplan-Meier plots now supports custom time range.
    See more updates here

November 22, 2019

    New Feature: Support for Treatment response data in the Oncoprint and Plots tab, including new Waterfall plot type. Read more in The Hyve's blog post
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November 15, 2019

    Enhancement: heatmap tracks in OncoPrint now has separate headers and sub-menus. example
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    Enhancement: global settings for query session

November 7, 2019

October 30, 2019

October 23, 2019

    Enhancement: Quick example links in Plots tab. example

October 14, 2019

    New Feature: Fusion Genes table in Study View. example
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October 11, 2019

    Enhancement: The Download interface on the homepage has been removed. Enhanced download functionality is now available after querying on the results page.
    Home page:
    Results page:
    Note that as before one can always download the full raw data on the Data Sets page or from Datahub.

October 9, 2019

September 18, 2019

    New Feature: The list and order of charts of a study will be automatically saved now as a user preference on the study view page.

September 6, 2019

August 13, 2019

July 26, 2019

June 19, 2019

    New Feature: Show Genome Aggregation Database (gnomAD) population frequencies in the mutations table - see example:

June 12, 2019

May 8, 2019

    New Feature: Show Post Translational Modification (PTM) information from dbPTM on the Mutation Mapper - see example:

April 26, 2019

March 29, 2019

    New Feature: Use the new quick search tab on the homepage to more easily navigate to a study, gene or patient:

March 15, 2019

February 22, 2019

    Enhancement: Exon number and HGVSc annotations are available in optional columns in the Mutations tab on the Results page and in the Patient View.
    New feature: option to a show regression line in the scatter plot in the Plots tab on the Results page
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February 19, 2019

    New feature: Copy-Number Segments tab on the Study View page using igv.js v2 - see example
    Improved Copy-Number Segments tab on the Results page
    New feature: OncoKB and Cancer Hotspots tracks in the Mutations tab on the Results page
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January 24, 2019

December 17, 2018

    The 10th phase of cBioPortal architectural upgrade is now complete: the Study View has been moved to the new architecture with numerous improvements. This marks the completion of the cBioPortal architectural refactoring! 🎉🎉🎉

October 29, 2018

    The ninth phase of the cBioPortal architectural upgrade is now complete: the results page is now a single-page application with better performance.
    Supported plotting mutations by type in Plots tab
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October 19, 2018

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October 17, 2018

August 20, 2018

    Now you can log in on the public cBioPortal with your Google account and save your virtual studies for quick analysis.
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August 7, 2018

    The eighth phase of the cBioPortal architectural upgrade is now complete: The Plots, Expression, Network, and Bookmarks tabs, and therefore all analysis tabs in the results page, have been moved to the new architecture.
    Updated the MutationMapper tool, now connecting to Genome Nexus for annotating mutations on the fly.
    Total Mutations and Fraction Genome Altered are now available in Plots tab for visualization and analysis.
    Enhanced clinical attribute selector for OncoPrint, now showing sample counts per attribute.

July 27, 2018